BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019A07SP1|AL427416
(823 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig435 1567 0.0
>3x_Contig435
Length = 1599
Score = 1567 bits (788), Expect = 0.0
Identities = 813/823 (98%), Gaps = 1/823 (0%)
Strand = Plus / Plus
Query: 1 gcgactggcaagtcttcttaaactggtcccattcttcaactgggattacacctaaatcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gcgactggcaagtcttcttaaactggtcccattcttcaactgggattacacctaaatcct 529
Query: 61 tgtagtnagtttcccatttctcgttttccttcactaattcagtccaattcttttggttgt 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tgtagtaagtttcccatttctcgttttccttcactaattcagtccaattcttttggttgt 589
Query: 121 tggagtcatcacgagtaccaaaagtcttttttggtcccttcttttgattctttcttctag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tggagtcatcacgagtaccaaaagtcttttttggtcccttcttttgattctttcttctag 649
Query: 181 ccatttctcctgcttgtatgttgcactagttctggtaagagagaaccgaataaacccaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ccatttctcctgcttgtatgttgcactagttctggtaagagagaaccgaataaacccaac 709
Query: 241 agcaagacacacaagaccgtatctgacaggaaacaatgctcatctcatcgcatcatcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 agcaagacacacaagaccgtatctgacaggaaacaatgctcatctcatcgcatcatcaac 769
Query: 301 ggattctaattttcactttttcttttcttcaaagtctcggaaaattttcaagtcacgtgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 ggattctaattttcactttttcttttcttcaaagtctcggaaaattttcaagtcacgtgg 829
Query: 361 tatgtmaatagagagactggatcaggtacacaatggaaggcatgtmaaacacacacacta 420
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 830 tatgtaaatagagagactggatcaggtacacaatggaaggcatgtaaaacacacacacta 889
Query: 421 agtagtattacctctaaatatcagctggtgagtatctgtcatttatatccttgctaatct 480
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 890 agtagtattacctctaaatatcagctggtgagtatctgtaatttatatccttgctaatct 949
Query: 481 gttgagaaaccccttcagacacggatccagtttccggcagccctaagtcatcttcgatcc 540
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 950 gttgagaaaccccttcagacacggatccagtttccggcagcactaagtaatcttcgatcc 1009
Query: 541 atttctccaataaccaactaattgtgatgagactggtctcatcgaatcgtttcactagat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 atttctccaataaccaactaattgtgatgagactggtctcatcgaatcgtttcactagat 1069
Query: 601 gcgggtacctttgtaagatgagttgtgtcaaaaagtaatgcaccactttcgtatcaatag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1070 gcgggtacctttgtaagatgagttgtgtcaaaaagtaatgcaccactttcgtatcaatag 1129
Query: 661 tgggtaatctcgtttgtaattcgtctctagtcaataatgggattggaacgatatggttca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1130 tgggtaatctcgtttgtaattcgtctctagtcaataatgggattggaacgatatggttca 1189
Query: 721 accttaaaccaaggcattcatccggkgaaagaattgatccatttggacctttgacgaggt 780
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1190 accttaaaccaaggcattcatccggtgaaagaattgatccatttggacctttgacgaggt 1249
Query: 781 tatggcttgcttcatatacgtttgcgttcatttggrggtatgc 823
||||||||||||||||||||||||| |||| |||| |||||||
Sbjct: 1250 tatggcttgcttcatatacgtttgccttca-ttggaggtatgc 1291
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6774
Number of Sequences: 1807
Number of extensions: 6774
Number of successful extensions: 98
Number of sequences better than 1.0e-20: 1
length of query: 823
length of database: 10,358,551
effective HSP length: 16
effective length of query: 807
effective length of database: 10,329,639
effective search space: 8336018673
effective search space used: 8336018673
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)